Gene: Lsat_1_v5_gn_5_144900
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_5_144900
- Transcript Identifier Lsat_1_v5_gn_5_144900.3
- Gene Type Coding gene
- Location Lsat_1_v8_lg_5 : 276753261-276756193 : negative
Gene Family Information
- ID HOM05D005801
- #Genes/#Species 134/90
- Phylogenetic origin
- ID ORTHO05D008555
- #Genes/#Species 118/89
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Lsat_1_v5_gn_5_144900.v5
- pacid 38967420
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006396 | IEA | InterPro | RNA processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008168 | IEA | InterPro | methyltransferase activity | |
| GO:0008173 | IEA | InterPro | RNA methyltransferase activity | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G19870 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT2G19870 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR029064 | 50S ribosomal protein L30e-like |
| IPR029028 | Alpha/beta knot methyltransferases |
| IPR013123 | RNA 2-O ribose methyltransferase, substrate binding |
| IPR029026 | tRNA (guanine-N1-)-methyltransferase, N-terminal |
| IPR004441 | RNA methyltransferase TrmH family |
| IPR001537 | tRNA/rRNA methyltransferase, SpoU type |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |