Gene: AT2G19870

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G19870
  • Transcript Identifier AT2G19870.1
  • Gene Type Coding gene
  • Location Chr2 : 8576034-8577803 : positive

Gene Family Information

  • ID HOM05D005801
  • #Genes/#Species 134/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G19870.1
  • uniprot Q8W497

Descriptions

  • Description tRNA/rRNA methyltransferase (SpoU) family protein
  • Computational description tRNA/rRNA methyltransferase (SpoU) family protein; FUNCTIONS IN: methyltransferase activity, RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537), RNA methyltransferase TrmH, group 3 (InterPro:IPR004441), RNA 2-O ribose methyltransferase, substrate binding (InterPro:IPR013123); Has 11661 Blast hits to 11576 proteins in 2636 species: Archae - 7; Bacteria - 7686; Metazoa - 749; Fungi - 216; Plants - 206; Viruses - 3; Other Eukaryotes - 2794 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
Gene OntologyRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0001510
IEA
GOA DatabaseRNA methylation
GO:0032259
IEA
GOA Databasemethylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008173
IEA
Gene OntologyRNA methyltransferase activity
GO:0008173
IEA
InterProRNA methyltransferase activity
GO:0003729
IDA
Gene OntologymRNA binding1
GO:0016740
IEA
GOA Databasetransferase activity
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0008168
IEA
InterPromethyltransferase activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISM
Gene Ontologymitochondrion
GO:0009507
IDA
GOA Databasechloroplast
GO:0009507
HDA
IBA
Gene Ontologychloroplast2 3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029028 Alpha/beta knot methyltransferases
IPR004441 RNA methyltransferase TrmH family
IPR013123 RNA 2-O ribose methyltransferase, substrate binding
IPR029064 50S ribosomal protein L30e-like
IPR001537 tRNA/rRNA methyltransferase, SpoU type
IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal
Mapman id Description
35.1 not assigned.annotated