Gene: Lsat_1_v5_gn_5_143121

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_5_143121
  • Transcript Identifier Lsat_1_v5_gn_5_143121.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_5 : 272785900-272787412 : positive

Gene Family Information

  • ID HOM05D000250
  • #Genes/#Species 1697/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_5_143121.v5
  • pacid 38970957

Descriptions

  • Description PTHR24031:SF294 - EUKARYOTIC INITIATION FACTOR 4A-1-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc07g040750.2
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G54270

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G13920
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc07g040750.2
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G13920

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os02g0146600
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G54270
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm Os02g0146600
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G72730
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT1G72730
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT1G72730
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G54270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001650 Helicase, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR011545 DEAD/DEAH box helicase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
17.4.2.1 Protein biosynthesis.translation initiation.mRNA loading.mRNA unwinding factor (eIF4A)