Gene: Os02g0146600

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os02g0146600
  • Transcript Identifier Os02t0146600-01
  • Gene Type Coding gene
  • Location chr02 : 2558794-2560737 : positive

Gene Family Information

  • ID HOM05D000250
  • #Genes/#Species 1697/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os02t0146600-01
  • MSU-ID LOC_Os02g05330.1
  • symbol OseIF4A
  • name eukaryotic initiation factor 4A
  • uniprot Q6Z2Z4

Descriptions

  • Description ATP-dependent DEAD box RNA helicase, Translation initiation factor
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G54270
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc06g062800.4
GO:0002183
IBA
GOA Databasecytoplasmic translational initiation
GO:0006413
IEA
GOA Databasetranslational initiation
GO:0006412
IEA
GOA Databasetranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G13920
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003743
IBA
IEA
GOA Databasetranslation initiation factor activity
GO:0005515
IPI
GOA Databaseprotein binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003724
IEA
GOA DatabaseRNA helicase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
IEA
GOA Databasenucleus
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G54270
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT1G72730
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT1G72730
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G72730
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G54270
GO:0005737
IDA
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR011545 DEAD/DEAH box helicase domain
Mapman id Description
17.4.2.1 Protein biosynthesis.translation initiation.mRNA loading.mRNA unwinding factor (eIF4A)