Gene: Lsat_1_v5_gn_4_93741
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_4_93741
- Transcript Identifier Lsat_1_v5_gn_4_93741.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_4 : 154929232-154932936 : positive
Gene Family Information
- ID HOM05D002765
- #Genes/#Species 250/99
- Phylogenetic origin
- ID ORTHO05D003083
- #Genes/#Species 245/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Lsat_1_v5_gn_4_93741.v5
- pacid 38934025
Descriptions
- Description K13998 - dihydrofolate reductase / thymidylate synthase (DHFR-TS)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006231 | IEA | InterPro | dTMP biosynthetic process | |
| GO:0006730 | IEA | InterPro | one-carbon metabolic process | |
| GO:0046654 | IEA | InterPro | tetrahydrofolate biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004799 | IEA | InterPro | thymidylate synthase activity | |
| GO:0004146 | IEA | InterPro | dihydrofolate reductase activity | |
| GO:0016741 | IEA | InterPro | transferase activity, transferring one-carbon groups | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G16370 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT2G16370 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT4G34570 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G16370 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000398 | Thymidylate synthase |
| IPR023451 | Thymidylate synthase/dCMP hydroxymethylase domain |
| IPR012262 | Bifunctional dihydrofolate reductase/thymidylate synthase |
| IPR001796 | Dihydrofolate reductase domain |
| IPR036926 | Thymidylate synthase/dCMP hydroxymethylase superfamily |
| IPR024072 | Dihydrofolate reductase-like domain superfamily |
| IPR045097 | Thymidylate synthase/dCMP hydroxymethylase |