Gene: Lsat_1_v5_gn_4_92360

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_4_92360
  • Transcript Identifier Lsat_1_v5_gn_4_92360.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_4 : 149302153-149304728 : positive

Gene Family Information

  • ID HOM05D000036
  • #Genes/#Species 5053/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_4_92360.v5
  • pacid 38935342

Descriptions

  • Description PTHR31707:SF55 - PECTINESTERASE 2-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042545
IEA
InterProcell wall modification
GO:0050829
ISO
PLAZA Integrative Orthologydefense response to Gram-negative bacterium AT3G14310
GO:0009620
ISO
PLAZA Integrative Orthologyresponse to fungus AT3G14310
GO:0009624
ISO
PLAZA Integrative Orthologyresponse to nematode AT3G14310
GO:1990110
ISO
PLAZA Integrative Orthologycallus formation AT1G53830
GO:0009617
ISO
PLAZA Integrative Orthologyresponse to bacterium AT1G11580

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004857
IEA
InterProenzyme inhibitor activity
GO:0030599
IEA
InterPropectinesterase activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G14310

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT1G53830
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT1G11580
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G14310
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G14310
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT3G14310
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT3G14310
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G11580

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035513 Invertase/pectin methylesterase inhibitor domain superfamily
IPR006501 Pectinesterase inhibitor domain
IPR006633 Carbohydrate-binding/sugar hydrolysis domain
IPR000070 Pectinesterase, catalytic
IPR011050 Pectin lyase fold/virulence factor
IPR012334 Pectin lyase fold
Mapman id Description
21.3.1.2.1 Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase