Gene: AT3G14310

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G14310
  • Transcript Identifier AT3G14310.1
  • Gene Type Coding gene
  • Location Chr3 : 4772214-4775095 : negative

Gene Family Information

  • ID HOM05D000036
  • #Genes/#Species 5053/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G14310.1
  • symbol PME3
  • Alias ATPME3,pectin methylesterase 3,OZS2,OVERLY ZINC SENSITIVE 2
  • uniprot O49006

Descriptions

  • Description pectin methylesterase 3
  • Computational description pectin methylesterase 3 (PME3); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: response to nematode; LOCATED IN: cell wall, apoplast, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectin methylesterase 2 (TAIR:AT1G53830.1); Has 3052 Blast hits to 2982 proteins in 347 species: Archae - 6; Bacteria - 639; Metazoa - 1; Fungi - 199; Plants - 2181; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042545
IEA
Gene Ontologycell wall modification
GO:0042545
IEA
InterProcell wall modification
GO:0071555
IEA
GOA Databasecell wall organization
GO:0043086
IEA
GOA Databasenegative regulation of catalytic activity
GO:0050829
IMP
Gene Ontologydefense response to Gram-negative bacterium1
GO:0009620
IEP
Gene Ontologyresponse to fungus1
GO:0009624
IMP
Gene Ontologyresponse to nematode2
GO:0045490
IEA
Gene Ontologypectin catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030599
IEA
GOA Databasepectinesterase activity
GO:0030599
IDA, IMP
ISS, IBA
Gene Ontologypectinesterase activity1 2 3 4
GO:0030599
IEA
InterPropectinesterase activity
GO:0004857
IEA
GOA Databaseenzyme inhibitor activity
GO:0004857
IEA
InterProenzyme inhibitor activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0045330
IEA
GOA Databaseaspartyl esterase activity
GO:0046910
IBA
Gene Ontologypectinesterase inhibitor activity4
GO:0003729
IDA
Gene OntologymRNA binding5

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0048046
IDA
IEA
GOA Databaseapoplast
GO:0048046
HDA
Gene Ontologyapoplast6
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005618
IEA
GOA Databasecell wall
GO:0005618
IDA
Gene Ontologycell wall2
GO:0005829
HDA
Gene Ontologycytosol7
GO:0005737
IDA
Gene Ontologycytoplasm2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006501 Pectinesterase inhibitor domain
IPR000070 Pectinesterase, catalytic
IPR035513 Invertase/pectin methylesterase inhibitor domain superfamily
IPR012334 Pectin lyase fold
IPR011050 Pectin lyase fold/virulence factor
Mapman id Description
21.3.1.2.1 Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase