Gene: Lsat_1_v5_gn_4_144281

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_4_144281
  • Transcript Identifier Lsat_1_v5_gn_4_144281.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_4 : 283299769-283301245 : positive

Gene Family Information

  • ID HOM05D002199
  • #Genes/#Species 305/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_4_144281.v5
  • pacid 38931165

Descriptions

  • Description PTHR10073:SF12 - MISMATCH REPAIR ENDONUCLEASE PMS2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015031
IEA
InterProprotein transport
GO:0006298
IEA
InterPromismatch repair
GO:0000956
ISO
PLAZA Homology (enrichment)nuclear-transcribed mRNA catabolic process HOM05D002199
GO:0006396
ISO
PLAZA Homology (enrichment)RNA processing HOM05D002199
GO:0000398
ISO
PLAZA Homology (enrichment)mRNA splicing, via spliceosome HOM05D002199

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0030983
IEA
InterPromismatched DNA binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044588 PX domain-containing protein EREX-like
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
IPR013507 DNA mismatch repair protein, S5 domain 2-like
IPR020568 Ribosomal protein S5 domain 2-type fold
Mapman id Description
35.1 not assigned.annotated