Gene: Lsat_1_v5_gn_2_52260
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_2_52260
- Transcript Identifier Lsat_1_v5_gn_2_52260.3
- Gene Type Coding gene
- Location Lsat_1_v8_lg_2 : 113396622-113399272 : positive
Gene Family Information
- ID HOM05D001155
- #Genes/#Species 535/97
- Phylogenetic origin
- ID ORTHO05D001080
- #Genes/#Species 497/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id Lsat_1_v5_gn_2_52260.v5
- pacid 38958899
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0001666 | ISO | PLAZA Integrative Orthology | response to hypoxia | AT5G54960 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016831 | IEA | InterPro | carboxy-lyase activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0030976 | IEA | InterPro | thiamine pyrophosphate binding | |
| GO:0000287 | IEA | InterPro | magnesium ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G54960 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012110 | Thiamine pyrophosphate (TPP)-dependent enzyme |
| IPR011766 | Thiamine pyrophosphate enzyme, C-terminal TPP-binding |
| IPR012001 | Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain |
| IPR029035 | DHS-like NAD/FAD-binding domain superfamily |
| IPR012000 | Thiamine pyrophosphate enzyme, central domain |
| IPR029061 | Thiamin diphosphate-binding fold |
| Mapman id | Description |
|---|---|
| 3.11.1.1 | Carbohydrate metabolism.fermentation.acetic acid biosynthesis.pyruvate decarboxylase (PDC) |