Gene: Lsat_1_v5_gn_1_52021
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_1_52021
- Transcript Identifier Lsat_1_v5_gn_1_52021.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_1 : 61417900-61421300 : positive
Gene Family Information
- ID HOM05D000070
- #Genes/#Species 3945/100
- Phylogenetic origin
- ID ORTHO05D001255
- #Genes/#Species 446/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Lsat_1_v5_gn_1_52021.v5
- pacid 38943331
Descriptions
- Description K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016787 | IEA | InterPro | hydrolase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003338 | CDC48, N-terminal subdomain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR009010 | Aspartate decarboxylase-like domain superfamily |
| IPR004201 | CDC48, domain 2 |
| IPR003593 | AAA+ ATPase domain |
| IPR041569 | AAA ATPase, AAA+ lid domain |
| IPR029067 | CDC48 domain 2-like superfamily |
| IPR005938 | AAA ATPase, CDC48 family |
| IPR003959 | ATPase, AAA-type, core |
| Mapman id | Description |
|---|---|
| 19.2.4.1.1 | Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.CDC48-NPL4-UFD1 chaperone complex.platform ATPase component CDC48 |