Gene: Lj5g0017900
General Information
Structural Information
- Species Lotus japonicus
- Gene Identifier Lj5g0017900
- Transcript Identifier Lj5g0017900.1
- Gene Type Coding gene
- Location chr5 : 1618104-1654226 : negative
Gene Family Information
- ID HOM05D000212
- #Genes/#Species 1878/99
- Phylogenetic origin
- ID ORTHO05D005509
- #Genes/#Species 156/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id Lj5g0017900.Lj1.0v1
- pacid 44927092
Descriptions
- Description 1.1.1.29//1.1.1.81 - Glycerate dehydrogenase / Hydroxypyruvate reductase // Hydroxypyruvate reductase / D-glycerate dehydrogenase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0071482 | ISO | PLAZA Integrative Orthology | cellular response to light stimulus | AT1G68010 |
GO:0009853 | ISO | PLAZA Integrative Orthology | photorespiration | AT1G68010 |
GO:0042631 | ISO | PLAZA Integrative Orthology | cellular response to water deprivation | AT1G68010 |
GO:0009854 | ISO | PLAZA Integrative Orthology | oxidative photosynthetic carbon pathway | AT1G68010 |
GO:0006511 | ISO | PLAZA Homology (enrichment) | ubiquitin-dependent protein catabolic process | HOM05D000212 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003677 | IEA | InterPro | DNA binding | |
GO:0051287 | IEA | InterPro | NAD binding | |
GO:0016616 | IEA | InterPro | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G68010 |
GO:0008465 | ISO | PLAZA Integrative Orthology | glycerate dehydrogenase activity | AT1G68010 |
GO:0008266 | ISO | PLAZA Integrative Orthology | poly(U) RNA binding | AT1G68010 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005777 | ISO | PLAZA Integrative Orthology | peroxisome | AT1G68010 |
GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G68010 |
GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT1G68010 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR015300 | DNA-binding pseudobarrel domain superfamily |
IPR003340 | B3 DNA binding domain |
IPR006140 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain |
IPR006139 | D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain |
IPR036291 | NAD(P)-binding domain superfamily |
Mapman id | Description |
---|---|
1.3.6.1 | Photosynthesis.photorespiration.hydroxypyruvate reductase activities.peroxisomal hydroxypyruvate reductase (HPR1) |