Gene: Lj4g0014475
General Information
Structural Information
- Species Lotus japonicus
- Gene Identifier Lj4g0014475
- Transcript Identifier Lj4g0014475.2
- Gene Type Coding gene
- Location chr4 : 71072168-71096833 : negative
Gene Family Information
- ID HOM05D003523
- #Genes/#Species 194/95
- Phylogenetic origin
- ID ORTHO05D004493
- #Genes/#Species 179/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Lj4g0014475.Lj1.0v1
- pacid 44939496
Descriptions
- Description PTHR35130//PTHR35130:SF1 - FAMILY NOT NAMED // MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 16
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:2001011 | ISO | PLAZA Integrative Orthology | positive regulation of plant-type cell wall cellulose biosynthetic process | AT4G04920 |
| GO:1905499 | ISO | PLAZA Integrative Orthology | trichome papilla formation | AT4G04920 |
| GO:1902066 | ISO | PLAZA Integrative Orthology | regulation of cell wall pectin metabolic process | AT4G04920 |
| GO:1901672 | ISO | PLAZA Integrative Orthology | positive regulation of systemic acquired resistance | AT4G04920 |
| GO:0006970 | ISO | PLAZA Integrative Orthology | response to osmotic stress | AT4G04920 |
| GO:0009631 | ISO | PLAZA Integrative Orthology | cold acclimation | AT4G04920 |
| GO:0010091 | ISO | PLAZA Integrative Orthology | trichome branching | AT4G04920 |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT4G04920 |
| GO:0032922 | ISO | PLAZA Integrative Orthology | circadian regulation of gene expression | AT4G04920 |
| GO:2001009 | ISO | PLAZA Integrative Orthology | regulation of plant-type cell wall cellulose biosynthetic process | AT4G04920 |
| GO:0048586 | ISO | PLAZA Integrative Orthology | regulation of long-day photoperiodism, flowering | AT4G04920 |
| GO:0010104 | ISO | PLAZA Integrative Orthology | regulation of ethylene-activated signaling pathway | AT4G04920 |
| GO:2000022 | ISO | PLAZA Integrative Orthology | regulation of jasmonic acid mediated signaling pathway | AT4G04920 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016592 | IEA | InterPro | mediator complex | |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT4G04920 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR038836 | Mediator of RNA polymerase II transcription subunit 16 |
| Mapman id | Description |
|---|---|
| 15.3.4.4.3.6 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.tail module.component MED16 |