Gene: Lalb_Chr24g0393431
General Information
Structural Information
- Species Lupinus albus
- Gene Identifier Lalb_Chr24g0393431
- Transcript Identifier Lalb_Chr24g0393431
- Gene Type Coding gene
- Location Lalb_Chr24 : 477380-478225 : negative
Gene Family Information
- ID HOM05D000479
- #Genes/#Species 1104/98
- Phylogenetic origin
- ID ORTHO05D001285
- #Genes/#Species 440/88
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Lalb_Chr24g0393431.v1
- pacid 44542485
- uniprot A0A6A5LIU5
Descriptions
- Description K12581 - CCR4-NOT transcription complex subunit 7/8 (CNOT7_8, CAF1, POP2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000289 | ISO | PLAZA Integrative Orthology | nuclear-transcribed mRNA poly(A) tail shortening | AT3G44260 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT3G44260 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT3G44260 |
| GO:0002213 | ISO | PLAZA Integrative Orthology | defense response to insect | AT3G44260 |
| GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis | |
| GO:0090503 | IEA | GOA Database | RNA phosphodiester bond hydrolysis, exonucleolytic |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G44260 |
| GO:0008408 | ISO | PLAZA Integrative Orthology | 3'-5' exonuclease activity | AT3G44260 |
| GO:0004535 | IEA | GOA Database | poly(A)-specific ribonuclease activity | |
| GO:0004535 | IEA | InterPro | poly(A)-specific ribonuclease activity | |
| GO:0004518 | IEA | GOA Database | nuclease activity | |
| GO:0004527 | IEA | GOA Database | exonuclease activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030014 | IEA | GOA Database | CCR4-NOT complex | |
| GO:0030014 | IEA | InterPro | CCR4-NOT complex | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005737 | IEA | GOA Database | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.4.2.1.2.2 | RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA deadenylation.CCR4-NOT complex.deadenylase component CAF1 |