Gene: Lalb_Chr01g0004981

General Information

Structural Information

  • Species Lupinus albus
  • Gene Identifier Lalb_Chr01g0004981
  • Transcript Identifier Lalb_Chr01g0004981
  • Gene Type Coding gene
  • Location Lalb_Chr01 : 2693273-2698381 : negative

Gene Family Information

  • ID HOM05D000917
  • #Genes/#Species 655/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lalb_Chr01g0004981.v1
  • pacid 44540820
  • uniprot A0A6A4R3P9

Descriptions

  • Description K12619 - 5'-3' exoribonuclease 2 (XRN2, RAT1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0090503
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, exonucleolytic
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0006139
IEA
GOA Databasenucleobase-containing compound metabolic process
GO:0006139
IEA
InterPronucleobase-containing compound metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004534
IEA
GOA Database5'-3' exoribonuclease activity
GO:0004534
IEA
InterPro5'-3' exoribonuclease activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004527
IEA
GOA Databaseexonuclease activity
GO:0004527
IEA
InterProexonuclease activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Cre06.g280050

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027073 5'-3' exoribonuclease
IPR017151 5'-3' exoribonuclease type 2
IPR004859 Putative 5-3 exonuclease
IPR041412 Xrn1, helical domain
Mapman id Description
35.1 not assigned.annotated