Gene: Haze_26493
General Information
Structural Information
- Species Corylus avellana
- Gene Identifier Haze_26493
- Transcript Identifier Haze_26493-RA
- Gene Type Coding gene
- Location 110038_RaGOO : 9835-13401 : positive
Gene Family Information
- ID HOM05D000924
- #Genes/#Species 651/100
- Phylogenetic origin
- ID ORTHO05D001209
- #Genes/#Species 456/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Haze_26493-RA
Descriptions
- Description Similar to BRR2C: DExH-box ATP-dependent RNA helicase DExH14 (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010228 | ISO | PLAZA Integrative Orthology | vegetative to reproductive phase transition of meristem | AT1G20960 |
| GO:0006397 | ISO | PLAZA Integrative Orthology | mRNA processing | AT1G20960 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0061630 | IEA | InterPro | ubiquitin protein ligase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G20960 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT2G42270 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G20960 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT1G20960 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001650 | Helicase, C-terminal |
| IPR011545 | DEAD/DEAH box helicase domain |
| IPR039525 | E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR035892 | C2 domain superfamily |
| IPR014756 | Immunoglobulin E-set |
| IPR004179 | Sec63 domain |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 16.2.7.1.4 | RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Brr2) |