Gene: HPP92_021489
General Information
Structural Information
- Species Vanilla planifolia
- Gene Identifier HPP92_021489
- Transcript Identifier Vpl11Ag21489.1
- Gene Type Coding gene
- Location CM028160.1 : 27034055-27053857 : positive
Gene Family Information
- ID HOM05D003633
- #Genes/#Species 189/97
- Phylogenetic origin
- ID ORTHO05D004245
- #Genes/#Species 186/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Vpl11Ag21489.1
- pid KAG0461192.1
Descriptions
- Description Structural maintenance of chromosomes protein ***
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051276 | IEA | InterPro | chromosome organization | |
| GO:0007062 | ISO | PLAZA Integrative Orthology | sister chromatid cohesion | AT2G27170 |
| GO:0007059 | ISO | PLAZA Integrative Orthology | chromosome segregation | AT2G27170 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity | |
| GO:0003682 | ISO | PLAZA Integrative Orthology | chromatin binding | AT2G27170 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005694 | IEA | InterPro | chromosome | |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G27170 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT2G27170 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT2G27170 |
| GO:0005819 | ISO | PLAZA Integrative Orthology | spindle | AT2G27170 |
| GO:0016363 | ISO | PLAZA Integrative Orthology | nuclear matrix | AT2G27170 |
| GO:0000785 | ISO | PLAZA Integrative Orthology | chromatin | AT2G27170 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003395 | RecF/RecN/SMC, N-terminal |
| IPR010935 | SMCs flexible hinge |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR024704 | Structural maintenance of chromosomes protein |
| IPR036277 | SMCs flexible hinge superfamily |
| IPR041741 | Structural maintenance of chromosomes 3, ABC domain, eukaryotic |
| Mapman id | Description |
|---|---|
| 13.3.4.1.2 | Cell cycle organisation.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.component SMC3/TTN7 |