Gene: HPP92_017290

General Information

Structural Information

  • Species Vanilla planifolia
  • Gene Identifier HPP92_017290
  • Transcript Identifier Vpl08Ag17290.1
  • Gene Type Coding gene
  • Location CM028157.1 : 30544610-30559626 : positive

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Vpl08Ag17290.1
  • pid KAG0470590.1

Descriptions

  • Description DEAD-box ATP-dependent RNA helicase-like protein *-*
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc01g057760.4
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT3G01540

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0016887
ISO
PLAZA Integrative OrthologyATP hydrolysis activity AT3G01540
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc01g057760.4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G14610
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G14610
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT3G06480

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001202 WW domain
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR036020 WW domain superfamily
IPR011545 DEAD/DEAH box helicase domain
IPR001650 Helicase, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
35.1 not assigned.annotated