Gene: Solyc01g057760.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g057760.4
  • Transcript Identifier Solyc01g057760.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 56844804-56853002 : positive

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g057760.4.1
  • uniprot A0A3Q7EDW0
  • gene_id Solyc01g057760

Descriptions

  • Description RNA helicase DEAD2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
IDA
Gene OntologyRNA metabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003723
IBA
GOA DatabaseRNA binding
GO:0003724
IBA
IEA
GOA DatabaseRNA helicase activity
GO:0003724
IDA
Gene OntologyRNA helicase activity1
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT3G06480
GO:1990904
IBA
GOA Databaseribonucleoprotein complex
GO:0005634
IBA
GOA Databasenucleus
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001202 WW domain
IPR001650 Helicase, C-terminal
IPR036020 WW domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR011545 DEAD/DEAH box helicase domain
Mapman id Description
35.1 not assigned.annotated