Gene: HPP92_017238

General Information

Structural Information

  • Species Vanilla planifolia
  • Gene Identifier HPP92_017238
  • Transcript Identifier Vpl08Ag17238.1
  • Gene Type Coding gene
  • Location CM028157.1 : 29599049-29601337 : positive

Gene Family Information

  • ID HOM05D003924
  • #Genes/#Species 178/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Vpl08Ag17238.1
  • pid KAG0470538.1

Descriptions

  • Description Regulator of nonsense transcripts 2 ***
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000184
IEA
InterPronuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D003924
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D003924

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007193 Up-frameshift suppressor 2, C-terminal
IPR016021 MIF4G-like domain superfamily
IPR039762 Nonsense-mediated mRNA decay protein Nmd2/UPF2
Mapman id Description
35.1 not assigned.annotated