Gene: HPP92_015247

General Information

Structural Information

  • Species Vanilla planifolia
  • Gene Identifier HPP92_015247
  • Transcript Identifier Vpl07Ag15247.1
  • Gene Type Coding gene
  • Location CM028156.1 : 24611121-24619795 : negative

Gene Family Information

  • ID HOM05D000113
  • #Genes/#Species 2932/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Vpl07Ag15247.1
  • pid KAG0473390.1

Descriptions

  • Description ATP-dependent RNA helicase, putative ***
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc01g079250.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003724
IEA
InterProRNA helicase activity
GO:0005524
IEA
InterProATP binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G47250
GO:0004386
ISO
PLAZA Homology (enrichment)helicase activity HOM05D000113

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT2G47250
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G62310
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G62310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044756 DHX15, DEXH-box helicase domain
IPR001650 Helicase, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR042035 DEAH helicase, winged-helix domain
IPR011545 DEAD/DEAH box helicase domain
IPR014001 Helicase superfamily 1/2, ATP-binding domain
Mapman id Description
35.1 not assigned.annotated