Gene: HPP92_005761
General Information
Structural Information
- Species Vanilla planifolia
- Gene Identifier HPP92_005761
- Transcript Identifier Vpl02Ag05761.1
- Gene Type Coding gene
- Location CM028151.1 : 32248961-32255132 : negative
Gene Family Information
- ID HOM05D001201
- #Genes/#Species 520/96
- Phylogenetic origin
- ID ORTHO05D001100
- #Genes/#Species 487/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Vpl02Ag05761.1
- pid KAG0492363.1
Descriptions
- Description DNA glycosylase *-*
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006281 | IEA | InterPro | DNA repair | |
| GO:0080111 | IEA | InterPro | DNA demethylation | |
| GO:0006284 | ISO | PLAZA Homology (enrichment) | base-excision repair | HOM05D001201 |
| GO:0010150 | ISO | PLAZA Integrative Orthology | leaf senescence | AT4G34060 |
| GO:0010216 | ISO | PLAZA Integrative Orthology | maintenance of DNA methylation | AT4G34060 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0019104 | IEA | InterPro | DNA N-glycosylase activity | |
| GO:0035514 | IEA | InterPro | DNA demethylase activity | |
| GO:0051747 | ISO | PLAZA Integrative Orthology | cytosine C-5 DNA demethylase activity | AT4G34060 |
| GO:0051539 | ISO | PLAZA Homology (enrichment) | 4 iron, 4 sulfur cluster binding | HOM05D001201 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT4G34060 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |