Gene: FvH4_1g24222
General Information
Structural Information
- Species Fragaria vesca
- Gene Identifier FvH4_1g24222
- Transcript Identifier FvH4_1g24222.t1
- Gene Type Coding gene
- Location Fvb1 : 16104166-16108080 : negative
Gene Family Information
- ID HOM05D000002
- #Genes/#Species 26594/98
- Phylogenetic origin
- ID ORTHO05D000001
- #Genes/#Species 28434/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id FvH4_1g24222.v4.0.a2
- pacid 50689407
Descriptions
- Description PF00665//PF07727//PF13976//PF14223 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015074 | IEA | InterPro | DNA integration |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001878 | Zinc finger, CCHC-type |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR025724 | GAG-pre-integrase domain |
| IPR001584 | Integrase, catalytic core |
| IPR013103 | Reverse transcriptase, RNA-dependent DNA polymerase |
| IPR036397 | Ribonuclease H superfamily |
| IPR036875 | Zinc finger, CCHC-type superfamily |
| IPR012337 | Ribonuclease H-like superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |