Gene: FAN26G2161

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN26G2161
  • Transcript Identifier FAN26G2161.1
  • Gene Type Coding gene
  • Location Fvb1-2 : 22475325-22475849 : negative

Gene Family Information

  • ID HOM05D002447
  • #Genes/#Species 278/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id augustus_masked-Fvb1-2-processed-gene-224.7.v1.0.a1
  • pacid 50467522

Descriptions

  • Description PTHR11467//PTHR11467:SF49 - HISTONE H1/H5 // SUBFAMILY NOT NAMED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006334
IEA
InterPronucleosome assembly
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:2000014
ISO
PLAZA Integrative Orthologyregulation of endosperm development Zm00001eb041850

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding Zm00001eb041850

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000786
IEA
InterPronucleosome
GO:0005634
IEA
InterPronucleus
GO:0000785
IEA
InterProchromatin
GO:0005829
ISO
PLAZA Tree-based Orthologycytosol AT1G14900
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus Zm00001eb041850

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036390 Winged helix DNA-binding domain superfamily
IPR005818 Linker histone H1/H5, domain H15
IPR031059 High mobility group protein HMGA, plant
IPR000116 High mobility group protein HMGA
IPR017956 AT hook, DNA-binding motif
IPR036388 Winged helix-like DNA-binding domain superfamily
Mapman id Description
35.1 not assigned.annotated