Gene: FAN21G3707

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN21G3707
  • Transcript Identifier FAN21G3707.1
  • Gene Type Coding gene
  • Location Fvb3-2 : 5389809-5404572 : positive

Gene Family Information

  • ID HOM05D002312
  • #Genes/#Species 293/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id augustus_masked-Fvb3-2-processed-gene-54.1.v1.0.a1
  • pacid 50484816

Descriptions

  • Description PF00560//PF01926//PF03446//PF06071//PF07714//PF08263//PF14833 - Leucine Rich Repeat (LRR_1) // 50S ribosome-binding GTPase (MMR_HSR1) // NAD binding domain of 6-phosphogluconate dehydrogenase (NAD_binding_2) // Protein of unknown function (DUF933) (YchF-GTPase_C) // Protein tyrosine kinase (Pkinase_Tyr) // Leucine rich repeat N-terminal domain (LRRNT_2) // NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase (NAD_binding_11)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT4G20940
GO:0071485
ISO
PLAZA Integrative Orthologycellular response to absence of light AT4G20940
GO:0071244
ISO
PLAZA Integrative Orthologycellular response to carbon dioxide AT4G20940
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT4G20940
GO:1901528
ISO
PLAZA Integrative Orthologyhydrogen peroxide mediated signaling pathway involved in stomatal movement AT4G20940
GO:1901529
ISO
PLAZA Integrative Orthologypositive regulation of anion channel activity AT4G20940
GO:0009789
ISO
PLAZA Integrative Orthologypositive regulation of abscisic acid-activated signaling pathway AT4G20940
GO:1901527
ISO
PLAZA Integrative Orthologyabscisic acid-activated signaling pathway involved in stomatal movement AT4G20940
GO:1900425
ISO
PLAZA Integrative Orthologynegative regulation of defense response to bacterium Os08g0199300
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G30580
GO:1901001
ISO
PLAZA Integrative Orthologynegative regulation of response to salt stress AT1G30580
GO:0007165
ISO
PLAZA Integrative Orthologysignal transduction AT4G20940
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT1G30580
GO:0090333
ISO
PLAZA Integrative Orthologyregulation of stomatal closure AT4G20940
GO:0006468
IEA
InterProprotein phosphorylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
ISO
PLAZA Integrative OrthologyGTPase activity Os08g0199300
GO:0005524
ISO
PLAZA Integrative OrthologyATP binding AT1G30580
GO:0005515
IEA
InterProprotein binding
GO:0016491
IEA
InterProoxidoreductase activity
GO:0050661
IEA
InterProNADP binding
GO:0051287
IEA
InterProNAD binding
GO:0004672
IEA
InterProprotein kinase activity
GO:0005525
IEA
InterProGTP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G30580
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G30580
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G20940

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036291 NAD(P)-binding domain superfamily
IPR001611 Leucine-rich repeat
IPR012675 Beta-grasp domain superfamily
IPR032675 Leucine-rich repeat domain superfamily
IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily
IPR023192 TGS-like domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR012676 TGS-like
IPR006073 GTP binding domain
IPR013029 YchF, C-terminal domain
IPR011009 Protein kinase-like domain superfamily
IPR013210 Leucine-rich repeat-containing N-terminal, plant-type
IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1
IPR003591 Leucine-rich repeat, typical subtype
IPR041706 YchF, N-terminal
IPR001245 Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain
IPR006115 6-phosphogluconate dehydrogenase, NADP-binding
IPR013328 6-phosphogluconate dehydrogenase, domain 2
Mapman id Description
18.4.1.3 Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (LRR-III)
4.2.7.6.1 Amino acid metabolism.degradation.branched-chain amino acid.valine.3-hydroxyisobutyrate dehydrogenase
4.2.7.7.1 Amino acid metabolism.degradation.branched-chain amino acid.isoleucine.3-hydroxypropionate dehydrogenase