Gene: FAN21G0684
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN21G0684
- Transcript Identifier FAN21G0684.1
- Gene Type Coding gene
- Location Fvb3-2 : 18744682-18769294 : negative
Gene Family Information
- ID HOM05D001312
- #Genes/#Species 478/99
- Phylogenetic origin
- ID ORTHO05D008204
- #Genes/#Species 122/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id maker-Fvb3-2-augustus-gene-187.22.v1.0.a1
- pacid 50482088
Descriptions
- Description PF00628//PF01078//PF02791//PF13519 - PHD-finger (PHD) // Magnesium chelatase, subunit ChlI (Mg_chelatase) // DDT domain (DDT) // von Willebrand factor type A domain (VWA_2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015995 | IEA | InterPro | chlorophyll biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016851 | IEA | InterPro | magnesium chelatase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT1G08520 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G08520 |
| GO:0009534 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid | AT1G08520 |
| GO:0010007 | ISO | PLAZA Integrative Orthology | magnesium chelatase complex | AT1G08520 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036465 | von Willebrand factor A-like domain superfamily |
| IPR041628 | ChlI/MoxR, AAA lid domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR018501 | DDT domain |
| IPR002035 | von Willebrand factor, type A |
| IPR001965 | Zinc finger, PHD-type |
| IPR000523 | Magnesium chelatase ChlI-like, catalytic domain |
| IPR011776 | Magnesium chelatase, ATPase subunit D |
| IPR003593 | AAA+ ATPase domain |
| IPR011011 | Zinc finger, FYVE/PHD-type |
| IPR041702 | Magnesium-chelatase BchD/ChlD, VWA domain |
| IPR019787 | Zinc finger, PHD-finger |
| Mapman id | Description |
|---|---|
| 12.4.2.2.1 | Chromatin organisation.nucleosome remodeling.ISWI chromatin remodeling complexes.ISWI-CDM complex.component DDP |
| 15.5.29 | RNA biosynthesis.transcriptional regulation.transcription factor (PHD) |
| 7.13.1.1.1 | Coenzyme metabolism.chlorophyll metabolism.chlorophyll biosynthesis.magnesium-chelatase complex.component CHLD |