Gene: FAN20G0838
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN20G0838
- Transcript Identifier FAN20G0838.1
- Gene Type Coding gene
- Location Fvb2-3 : 18270684-18273071 : positive
Gene Family Information
- ID HOM05D000070
- #Genes/#Species 3945/100
- Phylogenetic origin
- ID ORTHO05D001255
- #Genes/#Species 446/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id augustus_masked-Fvb2-3-processed-gene-182.8.v1.0.a1
- pacid 50565352
Descriptions
- Description PF02359//PF02933//PF05496//PF07724//PF09336 - Cell division protein 48 (CDC48), N-terminal domain (CDC48_N) // Cell division protein 48 (CDC48), domain 2 (CDC48_2) // Holliday junction DNA helicase ruvB N-terminus (RuvB_N) // AAA domain (Cdc48 subfamily) (AAA_2) // Vps4 C terminal oligomerisation domain (Vps4_C)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016787 | IEA | InterPro | hydrolase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR015415 | Vps4 oligomerisation, C-terminal |
| IPR004201 | CDC48, domain 2 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR003338 | CDC48, N-terminal subdomain |
| IPR003593 | AAA+ ATPase domain |
| IPR029067 | CDC48 domain 2-like superfamily |
| IPR009010 | Aspartate decarboxylase-like domain superfamily |
| IPR005938 | AAA ATPase, CDC48 family |
| IPR041569 | AAA ATPase, AAA+ lid domain |
| IPR003959 | ATPase, AAA-type, core |
| Mapman id | Description |
|---|---|
| 19.2.4.1.1 | Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.CDC48-NPL4-UFD1 chaperone complex.platform ATPase component CDC48 |