Gene: FAN19G2677

General Information

Structural Information

Species Fragaria x ananassa
Gene Identifier FAN19G2677
Transcript Identifier FAN19G2677.1
Gene Type Coding gene
Location Fvb1-4 : 9968413-9975095 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000446
#Genes/#Species 1165/97
Phylogenetic origin

ID ORTHO05D000321
#Genes/#Species 1120/97
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id maker-Fvb1-4-augustus-gene-99.24.v1.0.a1
pacid 50558661

Descriptions

Short descriptions
Ortholog descriptions

Description PF00933//PF01873//PF01915 - Glycosyl hydrolase family 3 N terminal domain (Glyco_hydro_3) // Domain found in IF2B/IF5 (eIF-5_eIF-2B) // Glycosyl hydrolase family 3 C-terminal domain (Glyco_hydro_3_C)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0045493	IEA	InterPro	xylan catabolic process
GO:0005975	IEA	InterPro	carbohydrate metabolic process
GO:0006413	IEA	InterPro	translational initiation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009044	IEA	InterPro	xylan 1,4-beta-xylosidase activity
GO:0004553	IEA	InterPro	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0003743	IEA	InterPro	translation initiation factor activity

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005774	ISO	PLAZA Integrative Orthology	vacuolar membrane	AT5G10560
GO:0005773	ISO	PLAZA Integrative Orthology	vacuole	AT5G10560

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR044993	Beta-D-xylosidase
IPR013783	Immunoglobulin-like fold
IPR036881	Glycoside hydrolase family 3 C-terminal domain superfamily
IPR016190	Translation initiation factor IF2/IF5, zinc-binding
IPR002772	Glycoside hydrolase family 3 C-terminal domain
IPR016189	Translation initiation factor IF2/IF5, N-terminal
IPR002735	Translation initiation factor IF2/IF5
IPR001764	Glycoside hydrolase, family 3, N-terminal
IPR017853	Glycoside hydrolase superfamily
IPR036962	Glycoside hydrolase, family 3, N-terminal domain superfamily

Mapman id	Description
17.4.1.2.1.2	Protein biosynthesis.translation initiation.Pre-Initiation Complex (PIC) module.eIF2 Met-tRNA binding factor activity.eIF2 Met-tRNA binding factor complex.component eIF2-beta
21.3.2.2.4.2	Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (BXL)