Gene: FAN17G0869

General Information

Structural Information

Species Fragaria x ananassa
Gene Identifier FAN17G0869
Transcript Identifier FAN17G0869.1
Gene Type Coding gene
Location Fvb4-2 : 25462947-25464843 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002675
#Genes/#Species 257/97
Phylogenetic origin

ID ORTHO05D003322
#Genes/#Species 231/97
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id maker-Fvb4-2-snap-gene-254.49.v1.0.a1
pacid 50530717

Descriptions

Short descriptions
Ortholog descriptions

Description K07562 - nonsense-mediated mRNA decay protein 3 (NMD3)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006611	ISO	PLAZA Integrative Orthology	protein export from nucleus	AT2G03820
GO:0007029	ISO	PLAZA Integrative Orthology	endoplasmic reticulum organization	AT2G03820
GO:0009834	ISO	PLAZA Integrative Orthology	plant-type secondary cell wall biogenesis	AT2G03820

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0043023	IEA	InterPro	ribosomal large subunit binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT2G03820

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT2G03820
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT2G03820
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT2G03820

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR039768	Ribosomal export protein Nmd3
IPR007064	Nmd3, N-terminal

Mapman id	Description
17.1.2.2.2.5	Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear export.export factor (NMD3)