Gene: FAN08G1022

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN08G1022
  • Transcript Identifier FAN08G1022.1
  • Gene Type Coding gene
  • Location Fvb5-3 : 4524378-4525224 : negative

Gene Family Information

  • ID HOM05D002447
  • #Genes/#Species 278/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id snap_masked-Fvb5-3-processed-gene-45.34.v1.0.a1
  • pacid 50464115

Descriptions

  • Description PF02178//PF11443 - AT hook motif (AT_hook) // Domain of unknown function (DUF2828) (DUF2828)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006334
IEA
InterPronucleosome assembly
GO:2000014
ISO
PLAZA Integrative Orthologyregulation of endosperm development Zm00001eb041850
GO:0006355
ISO
PLAZA Homology (enrichment)regulation of transcription, DNA-templated HOM05D002447

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding Zm00001eb041850

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0000786
IEA
InterPronucleosome
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G14900
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus Zm00001eb041850
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT1G14900

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR031059 High mobility group protein HMGA, plant
IPR017956 AT hook, DNA-binding motif
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR005818 Linker histone H1/H5, domain H15
IPR011205 Uncharacterised conserved protein UCP015417, vWA
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
35.1 not assigned.annotated