Gene: FAN04G2089
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN04G2089
- Transcript Identifier FAN04G2089.1
- Gene Type Coding gene
- Location Fvb5-4 : 21804973-21810722 : positive
Gene Family Information
- ID HOM05D002435
- #Genes/#Species 279/99
- Phylogenetic origin
- ID ORTHO05D002550
- #Genes/#Species 280/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id augustus_masked-Fvb5-4-processed-gene-218.1.v1.0.a1
- pacid 50459229
Descriptions
- Description PF00582//PF01399//PF05470 - Universal stress protein family (Usp) // PCI domain (PCI) // Eukaryotic translation initiation factor 3 subunit 8 N-terminus (eIF-3c_N)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006413 | IEA | InterPro | translational initiation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003743 | IEA | InterPro | translation initiation factor activity | |
| GO:0031369 | IEA | InterPro | translation initiation factor binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G56150 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G56150 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005852 | IEA | InterPro | eukaryotic translation initiation factor 3 complex | |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G56150 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G56150 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR008905 | Eukaryotic translation initiation factor 3 subunit C, N-terminal domain |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR006016 | UspA |
| IPR027516 | Eukaryotic translation initiation factor 3 subunit C |
| IPR000717 | Proteasome component (PCI) domain |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold |
| IPR006015 | Universal stress protein A family |
| Mapman id | Description |
|---|---|
| 17.4.1.3.3 | Protein biosynthesis.translation initiation.Pre-Initiation Complex (PIC) module.eIF3 mRNA-to-PIC binding complex.component eIF3c |