Gene: FAN04G1940

General Information

Structural Information

Species Fragaria x ananassa
Gene Identifier FAN04G1940
Transcript Identifier FAN04G1940.1
Gene Type Coding gene
Location Fvb5-4 : 18739955-18742251 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000291
#Genes/#Species 1525/99
Phylogenetic origin

ID ORTHO05D001358
#Genes/#Species 423/95
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id maker-Fvb5-4-augustus-gene-187.28.v1.0.a1
pacid 50460264

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR22951//PTHR22951:SF12 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0048268	IEA	InterPro	clathrin coat assembly
GO:0009860	ISO	PLAZA Integrative Orthology	pollen tube growth	AT4G02650
GO:0072659	ISO	PLAZA Integrative Orthology	protein localization to plasma membrane	AT4G02650

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005545	IEA	InterPro	1-phosphatidylinositol binding
GO:0030276	IEA	InterPro	clathrin binding
GO:0005543	IEA	InterPro	phospholipid binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0030136	IEA	InterPro	clathrin-coated vesicle
GO:0090404	ISO	PLAZA Integrative Orthology	pollen tube tip	AT4G02650
GO:0045334	ISO	PLAZA Integrative Orthology	clathrin-coated endocytic vesicle	AT4G02650
GO:0090406	ISO	PLAZA Integrative Orthology	pollen tube	AT4G02650

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR014712	ANTH domain superfamily
IPR011417	AP180 N-terminal homology (ANTH) domain
IPR008942	ENTH/VHS
IPR013809	ENTH domain

Mapman id	Description
22.3.1.8.2	Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.CCV accessory factor activities.adaptor protein (ECA1/2)