Gene: Eucgr.E03166
General Information
Structural Information
- Species Eucalyptus grandis
- Gene Identifier Eucgr.E03166
- Transcript Identifier Eucgr.E03166.1
- Gene Type Coding gene
- Location Chr05 : 52253247-52258662 : negative
Gene Family Information
- ID HOM05D006143
- #Genes/#Species 129/89
- Phylogenetic origin
- ID ORTHO05D007587
- #Genes/#Species 129/89
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- pacid 32029274
- synonym Egrandis_v1_0.010629m
- id Eucgr.E03166.v2.0
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006974 | IEA | InterPro | cellular response to DNA damage stimulus | |
| GO:0031348 | IEA | InterPro | negative regulation of defense response | |
| GO:0045892 | IEA | InterPro | negative regulation of transcription, DNA-templated | |
| GO:0043966 | ISO | PLAZA Integrative Orthology | histone H3 acetylation | AT4G18470 |
| GO:0002215 | ISO | PLAZA Integrative Orthology | defense response to nematode | AT4G18470 |
| GO:0009627 | ISO | PLAZA Integrative Orthology | systemic acquired resistance | AT4G18470 |
| GO:0051572 | ISO | PLAZA Integrative Orthology | negative regulation of histone H3-K4 methylation | AT4G18470 |
| GO:0016570 | ISO | PLAZA Integrative Orthology | histone modification | AT4G18470 |
| GO:0016444 | ISO | PLAZA Integrative Orthology | somatic cell DNA recombination | AT4G18470 |
| GO:0010113 | ISO | PLAZA Integrative Orthology | negative regulation of systemic acquired resistance | AT4G18470 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G18470 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT4G18470 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0030915 | IEA | InterPro | Smc5-Smc6 complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR034561 | Negative regulator of systemic acquired resistance SNI1 |
| Mapman id | Description |
|---|---|
| 14.3.6.3.2 | DNA damage response.homologous recombination repair (HR).Smc5-Smc6 complex.NSE5-NSE6 subcomplex.component NSE6/SNI1 |
| 26.9.3.1.3 | External stimuli response.pathogen.defense mechanisms.systemic acquired resistance (SAR).regulatory protein (SNI1) |