Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 2.2e-269 931.8 487 100.0
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 2.2e-165 586.3 302 99.0
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 8.2e-136 488.0 468 57.1
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 7.7e-134 481.5 469 55.4
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 5.5e-132 475.3 465 55.3
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 1.8e-130 470.3 466 55.2
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 3.5e-126 456.1 473 53.9
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 5.9e-126 455.3 473 53.9
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 3.8e-125 452.6 472 52.5
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 3.6e-123 446.0 475 52.8
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 2.3e-122 443.4 469 53.9
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 3.0e-122 443.0 467 52.5
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 4.0e-122 442.6 475 52.8
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 6.8e-122 441.8 468 52.6
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 5.7e-121 438.7 469 52.0
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 9.8e-121 438.0 467 52.7
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 4.9e-120 435.6 456 55.3
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 2.4e-119 433.3 469 53.7
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 4.1e-119 432.6 469 53.1
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 2.0e-118 430.3 472 52.3
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.7e-117 427.2 473 52.4
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 3.8e-117 426.0 480 51.9
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 9.5e-116 421.4 467 50.3
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 3.6e-115 419.5 482 51.0
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.3e-112 411.0 473 51.6
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 8.3e-112 408.3 460 50.7
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 5.4e-111 405.6 473 47.4
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 7.0e-111 405.2 466 49.4
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 7.8e-110 401.7 471 50.7
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 2.3e-109 400.2 466 48.9
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 2.5e-108 396.7 483 47.6
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 1.8e-106 390.6 414 50.7
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 1.8e-106 390.6 467 47.8
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.3e-106 390.2 460 50.7
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 4.0e-106 389.4 458 48.7
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 6.8e-106 388.7 474 46.8
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 5.8e-105 385.6 472 49.2
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 2.9e-104 383.3 479 44.9
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 2.9e-104 383.3 471 47.1
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 4.9e-104 382.5 467 47.5
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 8.3e-104 381.7 445 48.5
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 1.1e-103 381.3 474 44.7
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 1.6e-102 377.5 470 44.7
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 2.0e-102 377.1 470 45.5
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 2.0e-102 377.1 469 46.1
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 4.6e-102 375.9 467 47.8
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 1.1e-100 371.3 475 46.1
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 1.1e-100 371.3 471 45.4
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 1.5e-100 370.9 474 43.2
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 5.6e-100 369.0 466 44.2
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 7.3e-100 368.6 464 46.6
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 2.8e-99 366.7 470 44.9
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 1.4e-98 364.4 416 49.5
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 1.8e-98 364.0 472 43.9
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 4.0e-98 362.8 475 46.1
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 5.2e-98 362.5 484 45.2
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 2.0e-97 360.5 472 44.9
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 2.6e-97 360.1 473 47.4
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 5.8e-97 359.0 449 45.4
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 7.5e-97 358.6 466 44.8
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 3.7e-96 356.3 448 46.2
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 3.7e-96 356.3 472 44.3
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 8.3e-96 355.1 468 45.3
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 1.1e-95 354.8 469 45.8
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 5.4e-95 352.4 498 43.6
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 2.1e-94 350.5 438 46.8
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 4.6e-94 349.4 468 44.7
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 7.8e-94 348.6 482 44.0
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 7.3e-92 342.0 469 43.3
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 1.2e-91 341.3 480 41.9
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 2.1e-91 340.5 475 43.6
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 1.8e-90 337.4 468 42.3
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 3.1e-90 336.7 468 43.4
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 5.2e-90 335.9 468 44.9
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 8.9e-90 335.1 471 43.1
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 1.2e-89 334.7 348 52.9
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 1.5e-89 334.3 469 43.1
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 1.5e-89 334.3 469 43.5
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 2.2e-88 330.5 470 43.4
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 2.9e-88 330.1 469 42.9
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 1.4e-87 327.8 474 42.4
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 1.9e-87 327.4 469 42.6
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 1.9e-87 327.4 466 42.3
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 2.4e-87 327.0 359 50.7
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 7.1e-87 325.5 348 54.3
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 9.2e-87 325.1 409 42.8
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 7.8e-86 322.0 460 44.6
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 2.3e-85 320.5 494 41.3
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 2.1e-83 313.9 471 44.2
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 2.6e-81 307.0 461 41.9
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 9.9e-81 305.1 468 41.2
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 1.7e-80 304.3 299 54.5
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 4.9e-80 302.8 472 39.6
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 2.1e-78 297.4 447 42.1
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 9.3e-71 271.9 330 44.5
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 4.3e-60 236.5 467 36.0
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 9.3e-55 218.8 468 34.0
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.3e-51 208.4 326 40.8
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 3.7e-43 180.3 372 34.7
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 1.8e-42 177.9 180 49.4
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 6.1e-30 136.3 153 45.8
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 5.2e-29 133.3 231 36.4
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.2e-25 122.1 137 44.5
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.0e-24 119.0 137 43.8
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.0e-24 119.0 137 43.8
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 1.0e-24 119.0 222 36.5
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 5.0e-24 116.7 508 26.8
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 4.2e-23 113.6 168 36.3
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 4.2e-23 113.6 168 36.3
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.0e-21 107.1 120 43.3
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 1.4e-18 98.6 140 43.6
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 5.3e-18 96.7 88 58.0
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 2.0e-17 94.7 121 43.0
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 3.5e-17 94.0 259 32.8
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 1.0e-13 82.4 91 47.3
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 5.2e-13 80.1 430 23.3
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 2.0e-12 78.2 75 53.3
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 4.4e-12 77.0 55 69.1
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 9.8e-12 75.9 122 36.9
SEGI_26564 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 3.6e-06 57.4 115 29.6


User provided reference genes

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