Gene: ECA248G0500
General Information
Structural Information
- Species Erigeron canadensis
- Gene Identifier ECA248G0500
- Transcript Identifier ECA248G0500.1
- Gene Type Coding gene
- Location Conyza_canadensis_scaffold:9 : 34506461-34517002 : positive
Gene Family Information
- ID HOM05D001588
- #Genes/#Species 405/100
- Phylogenetic origin
- ID ORTHO05D002975
- #Genes/#Species 251/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- name g44157
- Alias g44157.t1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009097 | IEA | InterPro | isoleucine biosynthetic process | |
| GO:0002213 | ISO | PLAZA Integrative Orthology | defense response to insect | Solyc09g008670.3 |
| GO:0031349 | ISO | PLAZA Integrative Orthology | positive regulation of defense response | Solyc09g008670.3 |
| GO:0051289 | ISO | PLAZA Integrative Orthology | protein homotetramerization | Solyc09g008670.3 |
| GO:0080027 | ISO | PLAZA Integrative Orthology | response to herbivore | Solyc09g008670.3 |
| GO:0006567 | ISO | PLAZA Integrative Orthology | threonine catabolic process | Solyc09g008670.3 |
| GO:0009625 | ISO | PLAZA Integrative Orthology | response to insect | Solyc09g008670.3 |
| GO:0006565 | ISO | PLAZA Integrative Orthology | L-serine catabolic process | Solyc09g008670.3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0004794 | IEA | InterPro | L-threonine ammonia-lyase activity | |
| GO:0003941 | ISO | PLAZA Integrative Orthology | L-serine ammonia-lyase activity | Solyc09g008670.3 |
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | Solyc09g008670.3 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036052 | Tryptophan synthase beta subunit-like PLP-dependent enzyme |
| IPR002004 | Polyadenylate-binding protein/Hyperplastic disc protein |
| IPR006515 | Polyadenylate binding protein, human types 1, 2, 3, 4 |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR035979 | RNA-binding domain superfamily |
| IPR005787 | Threonine dehydratase, biosynthetic |
| IPR001926 | Pyridoxal-phosphate dependent enzyme |
| IPR036053 | PABC (PABP) domain |
| IPR000504 | RNA recognition motif domain |