Gene: ECA232G1041
General Information
Structural Information
- Species Erigeron canadensis
- Gene Identifier ECA232G1041
- Transcript Identifier ECA232G1041.1
- Gene Type Coding gene
- Location Conyza_canadensis_scaffold:2 : 45950827-45978694 : positive
Gene Family Information
- ID HOM05D000140
- #Genes/#Species 2610/97
- Phylogenetic origin
- ID ORTHO05D000087
- #Genes/#Species 2327/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- name g11222
- Alias g11222.t1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015074 | IEA | InterPro | DNA integration | |
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0030246 | IEA | InterPro | carbohydrate binding | |
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001878 | Zinc finger, CCHC-type |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR008979 | Galactose-binding-like domain superfamily |
| IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
| IPR025724 | GAG-pre-integrase domain |
| IPR001584 | Integrase, catalytic core |
| IPR000922 | D-galactoside/L-rhamnose binding SUEL lectin domain |
| IPR017853 | Glycoside hydrolase superfamily |
| IPR031330 | Glycoside hydrolase 35, catalytic domain |
| IPR001944 | Glycoside hydrolase, family 35 |
| IPR036397 | Ribonuclease H superfamily |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR036875 | Zinc finger, CCHC-type superfamily |
| IPR041392 | Beta-galactosidase, beta-sandwich domain |
| IPR043159 | D-galactoside/L-rhamnose binding SUEL lectin domain superfamily |
| IPR000757 | Glycoside hydrolase family 16 |
| IPR013103 | Reverse transcriptase, RNA-dependent DNA polymerase |
| Mapman id | Description |
|---|---|
| 21.3.2.2.3 | Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase (BGAL) |