Gene: Duzib093G2159
General Information
Structural Information
- Species Durio zibethinus
- Gene Identifier Duzib093G2159
- Transcript Identifier Duzib093G2159.01
- Gene Type Coding gene
- Location NW_019167937.1 : 10166651-10173528 : negative
Gene Family Information
- ID HOM05D001720
- #Genes/#Species 376/94
- Phylogenetic origin
- ID ORTHO05D001813
- #Genes/#Species 351/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name LOC111312106
- name XM_022912105.1
- pid XP_022767840.1
- id gene-LOC111312106
- uniprot A0A6P6ASM8
Descriptions
- product protein SCAR2-like, transcript variant X1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030036 | IEA | GOA Database | actin cytoskeleton organization | |
| GO:0030036 | IEA | InterPro | actin cytoskeleton organization | |
| GO:0045010 | ISO | PLAZA Integrative Orthology | actin nucleation | AT2G38440 |
| GO:0010091 | ISO | PLAZA Integrative Orthology | trichome branching | AT2G38440 |
| GO:0010090 | ISO | PLAZA Integrative Orthology | trichome morphogenesis | AT2G38440 |
| GO:0098609 | ISO | PLAZA Integrative Orthology | cell-cell adhesion | AT2G38440 |
| GO:0051127 | ISO | PLAZA Integrative Orthology | positive regulation of actin nucleation | AT5G01730 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003779 | IEA | GOA Database | actin binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G01730 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005856 | IEA | GOA Database | cytoskeleton | |
| GO:0005856 | IEA | InterPro | cytoskeleton | |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0031209 | ISO | PLAZA Integrative Orthology | SCAR complex | AT5G01730 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G01730 |
| GO:0010287 | ISO | PLAZA Integrative Orthology | plastoglobule | AT5G01730 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G38440 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR028288 | SCAR/WAVE family |
| Mapman id | Description |
|---|---|
| 20.2.2.2.4 | Cytoskeleton organisation.microfilament network.actin polymerisation.SCAR/WAVE ARP2/3-activating complex.component SCAR |