Gene: CsaV3_4G029550
General Information
Structural Information
- Species Cucumis sativus L.
- Gene Identifier CsaV3_4G029550
- Transcript Identifier CsaV3_4G029550.1
- Gene Type Coding gene
- Location chr4 : 19091870-19115512 : negative
Gene Family Information
- ID HOM05D003944
- #Genes/#Species 177/97
- Phylogenetic origin
- ID ORTHO05D005521
- #Genes/#Species 156/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid CsaV3_4G029550.1
Descriptions
- Description DNA gyrase subunit B
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006265 | IEA | InterPro | DNA topological change |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003918 | IEA | InterPro | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003916 | ISO | PLAZA Integrative Orthology | DNA topoisomerase activity | AT5G04130 |
| GO:0034335 | ISO | PLAZA Integrative Orthology | DNA negative supercoiling activity | AT5G04130 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005694 | IEA | InterPro | chromosome | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G10270 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G10270 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT3G10270 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001241 | DNA topoisomerase, type IIA |
| IPR036890 | Histidine kinase/HSP90-like ATPase superfamily |
| IPR013506 | DNA topoisomerase, type IIA, subunit B, domain 2 |
| IPR003594 | Histidine kinase/HSP90-like ATPase |
| IPR002288 | DNA gyrase B subunit, C-terminal |
| IPR020568 | Ribosomal protein S5 domain 2-type fold |
| IPR013760 | DNA topoisomerase, type IIA-like domain superfamily |
| IPR034160 | DNA gyrase subunit B, TOPRIM domain |
| IPR011557 | DNA gyrase, subunit B |
| IPR014721 | Ribosomal protein S5 domain 2-type fold, subgroup |
| IPR000565 | DNA topoisomerase, type IIA, subunit B |
| IPR013759 | DNA topoisomerase, type IIA, subunit B, C-terminal |
| IPR006171 | TOPRIM domain |
| Mapman id | Description |
|---|---|
| 13.5.3.2 | Cell cycle organisation.organellar DNA replication.DNA gyrase complex.subunit B |