Gene: Cre17.g734200
General Information
Structural Information
- Species Chlamydomonas reinhardtii
- Gene Identifier Cre17.g734200
- Transcript Identifier Cre17.g734200.t1.2
- Gene Type Coding gene
- Location chromosome_17 : 4855940-4860139 : negative
Gene Family Information
- ID HOM05D002023
- #Genes/#Species 327/100
- Phylogenetic origin
- ID ORTHO05D002049
- #Genes/#Species 323/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Cre17.g734200.v5.5
- pacid 30782833
- alias g17751.t1
- geneName DPA1
- uniprot A8IW39
Descriptions
- Description L,L-diaminopimelate aminotransferase
- Description Putative L,L-diaminopimelate aminotransferase (EC 2.6.1.-); aminotransferase, class 1 & 2; based on similarity to novel L,L-diaminopimelate aminotransferase (AGD2) in Arabidopsis (GenBank NP_567934) involved in lysine biosynthesis [PMID: 16361515]; organe
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT2G13810 |
| GO:0009862 | ISO | PLAZA Integrative Orthology | systemic acquired resistance, salicylic acid mediated signaling pathway | AT4G33680 |
| GO:0062034 | ISO | PLAZA Integrative Orthology | L-pipecolic acid biosynthetic process | AT2G13810 |
| GO:0010150 | ISO | PLAZA Integrative Orthology | leaf senescence | AT2G13810 |
| GO:0009089 | ISO | PLAZA Integrative Orthology | lysine biosynthetic process via diaminopimelate | AT4G33680 |
| GO:0009627 | ISO | PLAZA Integrative Orthology | systemic acquired resistance | AT2G13810 |
| GO:0009058 | IEA | GOA Database | biosynthetic process | |
| GO:0009058 | IEA | InterPro | biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0062045 | ISO | PLAZA Integrative Orthology | L-lysine alpha-aminotransferase | AT2G13810 |
| GO:0005507 | ISO | PLAZA Integrative Orthology | copper ion binding | AT4G33680 |
| GO:0010285 | ISO | PLAZA Integrative Orthology | L,L-diaminopimelate aminotransferase activity | AT4G33680 |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0030170 | IEA | GOA Database | pyridoxal phosphate binding | |
| GO:0030170 | IEA | InterPro | pyridoxal phosphate binding | |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0008483 | IEA | GOA Database | transaminase activity | |
| GO:0008483 | IEA | InterPro | transaminase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G33680 |
| GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | AT2G13810 |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT4G33680 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR019942 | LL-diaminopimelate aminotransferase/aminotransferase ALD1 |
| IPR015421 | Pyridoxal phosphate-dependent transferase, major domain |
| IPR015424 | Pyridoxal phosphate-dependent transferase |
| IPR004839 | Aminotransferase, class I/classII |
| IPR015422 | Pyridoxal phosphate-dependent transferase, small domain |
| Mapman id | Description |
|---|---|
| 4.1.2.2.3.3 | Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.LL-diaminopimelate aminotransferase |