Gene: Cpa.g.sc26.243

General Information

Structural Information

  • Species Carica papaya
  • Gene Identifier Cpa.g.sc26.243
  • Transcript Identifier Cpa.t.sc26.243
  • Gene Type Coding gene
  • Location supercontig_26 : 1731017-1732157 : positive

Gene Family Information

  • ID HOM05D004376
  • #Genes/#Species 163/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 16415187
  • tid PAC:16415187

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001522
IEA
InterPropseudouridine synthesis
GO:0009451
IEA
InterProRNA modification
GO:0031119
ISO
PLAZA Homology (enrichment)tRNA pseudouridine synthesis HOM05D004376

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0009982
IEA
InterPropseudouridine synthase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G20370

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020095 Pseudouridine synthase I, TruA, C-terminal
IPR001406 Pseudouridine synthase I, TruA
IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain
IPR020103 Pseudouridine synthase, catalytic domain superfamily
Mapman id Description
16.5.3.1 RNA processing.RNA modification.pseudouridylation.tRNA pseudouridine synthase (TruA)