Gene: ClCG11G001530

General Information

Structural Information

  • Species Citrullus lanatus
  • Gene Identifier ClCG11G001530
  • Transcript Identifier ClCG11G001530.1
  • Gene Type Coding gene
  • Location CG_Chr11 : 1730018-1734497 : positive

Gene Family Information

  • ID HOM05D000824
  • #Genes/#Species 721/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid ClCG11G001530.1
  • name snap_masked-CGscf_0021-processed-gene-1.257
  • name snap_masked-CGscf_0021-processed-gene-1.257-mRNA-1

Descriptions

  • Description Replication protein A 70 kDa DNA-binding subunit
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006260
IEA
InterProDNA replication
GO:0048232
ISO
PLAZA Integrative Orthologymale gamete generation AT2G06510
GO:0051026
ISO
PLAZA Integrative Orthologychiasma assembly AT2G06510
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair Os02g0776800
GO:0007131
ISO
PLAZA Integrative Orthologyreciprocal meiotic recombination AT2G06510
GO:0007140
ISO
PLAZA Integrative Orthologymale meiotic nuclear division Os02g0776800
GO:0007141
ISO
PLAZA Integrative Orthologymale meiosis I AT2G06510
GO:0006310
ISO
PLAZA Homology (enrichment)DNA recombination HOM05D000824
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT2G06510

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Os02g0776800

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT2G06510

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR007199 Replication factor-A protein 1, N-terminal
IPR031657 Replication protein A, OB domain
IPR012340 Nucleic acid-binding, OB-fold
IPR013955 Replication factor A, C-terminal
Mapman id Description
13.2.3.5.1 Cell cycle organisation.DNA replication.elongation.single-stranded-DNA binding RPA complex.component RPA1
13.3.5.4.4.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.DNA strand exchange.RPA presynaptic filament assembly factor complex.component RPA1