Gene: ClCG08G007670
General Information
Structural Information
- Species Citrullus lanatus
- Gene Identifier ClCG08G007670
- Transcript Identifier ClCG08G007670.1
- Gene Type Coding gene
- Location CG_Chr08 : 20221556-20239139 : positive
Gene Family Information
- ID HOM05D003507
- #Genes/#Species 194/95
- Phylogenetic origin
- ID ORTHO05D004324
- #Genes/#Species 184/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid ClCG08G007670.1
- name maker-CGscf_0026-snap-gene-1.619
- name maker-CGscf_0026-snap-gene-1.619-mRNA-1
Descriptions
- Description Ras-related protein Rab-5C
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006072 | IEA | InterPro | glycerol-3-phosphate metabolic process | |
| GO:0019563 | ISO | PLAZA Integrative Orthology | glycerol catabolic process | AT3G10370 |
| GO:0006127 | ISO | PLAZA Integrative Orthology | glycerophosphate shuttle | AT3G10370 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004368 | IEA | InterPro | glycerol-3-phosphate dehydrogenase (quinone) activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0003924 | IEA | InterPro | GTPase activity | |
| GO:0005525 | IEA | InterPro | GTP binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009331 | IEA | InterPro | glycerol-3-phosphate dehydrogenase complex | |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT3G10370 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR031656 | Alpha-glycerophosphate oxidase, C-terminal |
| IPR000447 | FAD-dependent glycerol-3-phosphate dehydrogenase |
| IPR006076 | FAD dependent oxidoreductase |
| IPR001806 | Small GTPase |
| IPR036188 | FAD/NAD(P)-binding domain superfamily |
| IPR038299 | Alpha-glycerophosphate oxidase, C-terminal domain superfamily |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR005225 | Small GTP-binding protein domain |
| Mapman id | Description |
|---|---|
| 22.3.4.1.6 | Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.F-class RAB GTPase |
| 22.3.4.5.1 | Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB5-RAB7-dependent pathway.small GTPase (RAB5) |
| 5.7.4.4 | Lipid metabolism.lipid degradation.glycerol metabolism.FAD-dependent glycerol-3-phosphate dehydrogenase |