Gene: ClCG01G025330

General Information

Structural Information

  • Species Citrullus lanatus
  • Gene Identifier ClCG01G025330
  • Transcript Identifier ClCG01G025330.1
  • Gene Type Coding gene
  • Location CG_Chr01 : 38397713-38399323 : positive

Gene Family Information

  • ID HOM05D000128
  • #Genes/#Species 2706/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid ClCG01G025330.1
  • name genemark-CGscf_0043-processed-gene-0.186
  • name genemark-CGscf_0043-processed-gene-0.186-mRNA-1

Descriptions

  • Description FAD-binding Berberine family protein LENGTH=530
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT2G34810
GO:0009753
ISO
PLAZA Integrative Orthologyresponse to jasmonic acid AT2G34810
GO:0071456
ISO
PLAZA Integrative Orthologycellular response to hypoxia AT1G26410

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IEA
InterProoxidoreductase activity
GO:0050660
IEA
InterProflavin adenine dinucleotide binding
GO:0016899
ISO
PLAZA Integrative Orthologyoxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor AT1G01980

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G30740
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT1G26380
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT1G01980
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT1G01980
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT1G30740
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G01980

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016169 FAD-binding, type PCMH, subdomain 2
IPR012951 Berberine/berberine-like
IPR016167 FAD-binding, type PCMH, subdomain 1
IPR006094 FAD linked oxidase, N-terminal
IPR036318 FAD-binding, type PCMH-like superfamily
Mapman id Description
50.1.1 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor