Gene: Cfa008769
General Information
Structural Information
- Species Carpinus fangiana
- Gene Identifier Cfa008769
- Transcript Identifier Cfa008769.t1
- Gene Type Coding gene
- Location Cfa03 : 21070209-21084836 : positive
Gene Family Information
- ID HOM05D004870
- #Genes/#Species 152/96
- Phylogenetic origin
- ID ORTHO05D006061
- #Genes/#Species 148/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Cfa008769.t1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006801 | IEA | InterPro | superoxide metabolic process | |
| GO:0006207 | IEA | InterPro | 'de novo' pyrimidine nucleobase biosynthetic process | |
| GO:0009220 | ISO | PLAZA Integrative Orthology | pyrimidine ribonucleotide biosynthetic process | AT5G23300 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0004784 | IEA | InterPro | superoxide dismutase activity | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0004152 | IEA | InterPro | dihydroorotate dehydrogenase activity | |
| GO:0016627 | IEA | InterPro | oxidoreductase activity, acting on the CH-CH group of donors |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G23300 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013785 | Aldolase-type TIM barrel |
| IPR019832 | Manganese/iron superoxide dismutase, C-terminal |
| IPR005719 | Dihydroorotate dehydrogenase, class 2 |
| IPR036314 | Manganese/iron superoxide dismutase, C-terminal domain superfamily |
| IPR019831 | Manganese/iron superoxide dismutase, N-terminal |
| IPR005720 | Dihydroorotate dehydrogenase domain |
| IPR036324 | Manganese/iron superoxide dismutase, N-terminal domain superfamily |
| IPR001189 | Manganese/iron superoxide dismutase |
| Mapman id | Description |
|---|---|
| 10.2.1.1 | Redox homeostasis.enzymatic reactive oxygen scavenging.superoxide dismutase activities.iron superoxide dismutase (FSD) |
| 15.6.1.2.2.4 | RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essential co-factor components.component PAP4/FSD3 |
| 6.2.1.4 | Nucleotide metabolism.pyrimidines.de novo biosynthesis.dihydroorotate dehydrogenase |