Gene: Cfa008242

General Information

Structural Information

  • Species Carpinus fangiana
  • Gene Identifier Cfa008242
  • Transcript Identifier Cfa008242.t1
  • Gene Type Coding gene
  • Location Cfa03 : 12423111-12447169 : positive

Gene Family Information

  • ID HOM05D001120
  • #Genes/#Species 549/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Cfa008242.t1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process AT5G62190
GO:0080167
ISO
PLAZA Integrative Orthologyresponse to karrikin AT5G62210
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G07190
GO:0006508
IEA
InterProproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity AT5G62190
GO:0004222
IEA
InterPrometalloendopeptidase activity
GO:0004386
IEA
InterProhelicase activity
GO:0003723
IEA
InterProRNA binding
GO:0005515
IEA
InterProprotein binding
GO:0005524
IEA
InterProATP binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031225
ISO
PLAZA Integrative Orthologyanchored component of membrane AT5G07190
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT5G62200
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G62190
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G51740
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G41475
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G62190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR010417 Embryo-specific ATS3
IPR001915 Peptidase M48
IPR001650 Helicase, C-terminal
IPR035979 RNA-binding domain superfamily
IPR011545 DEAD/DEAH box helicase domain
IPR040911 Exostosin, GT47 domain
IPR036392 PLAT/LH2 domain superfamily
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR012562 GUCT
Mapman id Description
19.4.5.5.3 Protein homeostasis.proteolysis.metallopeptidase activities.M48 families.zinc metalloprotease (OMA1)
21.2.1.1.6 Cell wall organisation.hemicellulose.xyloglucan.biosynthesis.galactosyltransferase (XLT2)