Gene: AT5G62200
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G62200
- Transcript Identifier AT5G62200.1
- Gene Type Coding gene
- Location Chr5 : 24984463-24985674 : negative
Gene Family Information
- ID HOM05D001120
- #Genes/#Species 549/99
- Phylogenetic origin
- ID ORTHO05D002447
- #Genes/#Species 287/87
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G62200.1
- uniprot Q6NPM5
Descriptions
- Description Embryo-specific protein 3, (ATS3)
- Computational description Embryo-specific protein 3, (ATS3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Embryo-specific 3 (InterPro:IPR010417); BEST Arabidopsis thaliana protein match is: Embryo-specific protein 3, (ATS3) (TAIR:AT2G41475.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008150 | ND | Gene Ontology | biological_process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031225 | TAS | Gene Ontology | anchored component of membrane | 2 |
| GO:0000325 | HDA | Gene Ontology | plant-type vacuole | 3 |
| GO:0009536 | HDA | Gene Ontology | plastid | 4 |
| GO:0005576 | IEA | GOA Database | extracellular region | |
| GO:0005774 | IDA | GOA Database | vacuolar membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |