Gene: AT5G07190

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G07190
  • Transcript Identifier AT5G07190.1
  • Gene Type Coding gene
  • Location Chr5 : 2237610-2238488 : positive

Gene Family Information

  • ID HOM05D001120
  • #Genes/#Species 549/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G07190.1
  • symbol ATS3
  • full_name seed gene 3
  • uniprot Q9LYP6

Descriptions

  • Description embryo-specific protein 3
  • Computational description seed gene 3 (ATS3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: anchored to membrane, membrane; EXPRESSED IN: embryo, leaf whorl, carpel, seed, leaf; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Embryo-specific 3 (InterPro:IPR010417); BEST Arabidopsis thaliana protein match is: Embryo-specific protein 3, (ATS3) (TAIR:AT5G62210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009793
TAS
Gene Ontologyembryo development ending in seed dormancy1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005634
ISM
Gene Ontologynucleus
GO:0031225
TAS
Gene Ontologyanchored component of membrane2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010417 Embryo-specific ATS3
IPR036392 PLAT/LH2 domain superfamily
Mapman id Description
35.1 not assigned.annotated