Gene: Cc08_g06520

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc08_g06520
  • Transcript Identifier Cc08_g06520.1
  • Gene Type Coding gene
  • Location chr8 : 15521415-15524074 : positive

Gene Family Information

  • ID HOM05D002682
  • #Genes/#Species 256/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB B9N668
  • UniProtKB I1M9U2
  • UniProtKB O81126
  • UniProtKB I1M9U3
  • UniProtKB Q69KL9
  • UniProtKB Q6K4N0
  • id GSCOCG00036043001

Descriptions

  • Description Serine/arginine-rich splicing factor RSZ22
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
ISO
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT4G31580

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G24590
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G24590

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT4G31580
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G24590
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G24590

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR001878 Zinc finger, CCHC-type
IPR036875 Zinc finger, CCHC-type superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
16.2.6.4 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (RSZ21/22)