Gene: Cc07_g18180

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc07_g18180
  • Transcript Identifier Cc07_g18180.1
  • Gene Type Coding gene
  • Location chr7 : 15489192-15490100 : positive

Gene Family Information

  • ID HOM05D002244
  • #Genes/#Species 300/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB Q5G1S8
  • UniProtKB Q8GWE0
  • UniProtKB F6HCW3
  • UniProtKB A5B4A6
  • UniProtKB Q9LS25
  • UniProtKB Q9FSB6
  • id GSCOCG00018785001

Descriptions

  • Description Putative Pentatricopeptide repeat-containing protein At4g16390, chloroplastic
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045727
ISO
PLAZA Integrative Orthologypositive regulation of translation Zm00001eb008730
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT4G16390
GO:0031425
ISO
PLAZA Integrative Orthologychloroplast RNA processing AT4G16390

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding Zm00001eb008730

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma Zm00001eb008730
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G16390

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
IPR033443 Pentacotripeptide-repeat region of PRORP
Mapman id Description
35.1 not assigned.annotated