Gene: Cc06_g10910

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc06_g10910
  • Transcript Identifier Cc06_g10910.1
  • Gene Type Coding gene
  • Location chr6 : 8882148-8885075 : positive

Gene Family Information

  • ID HOM05D001300
  • #Genes/#Species 483/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB Q9SSK1
  • UniProtKB I1K622
  • UniProtKB B9N5I4
  • UniProtKB Q9SW96
  • UniProtKB F6HGX0
  • UniProtKB O48593
  • id GSCOCG00041718001

Descriptions

  • Description Asparagine--tRNA ligase, cytoplasmic 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0006421
IEA
InterProasparaginyl-tRNA aminoacylation
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G56680
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT5G56680

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
InterPronucleotide binding
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0005524
IEA
InterProATP binding
GO:0004816
IEA
InterProasparagine-tRNA ligase activity
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G56680
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G56680
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G56680

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb
IPR004522 Asparagine-tRNA ligase
IPR012340 Nucleic acid-binding, OB-fold
IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
Mapman id Description
17.2.3 Protein biosynthesis.aminoacyl-tRNA synthetase activities.asparagine-tRNA ligase