Gene: Cc04_g03840
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc04_g03840
- Transcript Identifier Cc04_g03840.1
- Gene Type Coding gene
- Location chr4 : 2862185-2864225 : negative
Gene Family Information
- ID HOM05D000221
- #Genes/#Species 1858/100
- Phylogenetic origin
- ID ORTHO05D001308
- #Genes/#Species 435/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- UniProtKB D7SUM0
- UniProtKB Q84MP7
- UniProtKB Q9C944
- UniProtKB A9PIK3
- UniProtKB C6T2B0
- UniProtKB Q9SII0
- id GSCOCG00022094001
Descriptions
- Description Probable histone H2A variant 3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0044030 | ISO | PLAZA Integrative Orthology | regulation of DNA methylation | AT1G52740 |
| GO:0009266 | ISO | PLAZA Integrative Orthology | response to temperature stimulus | AT1G52740 |
| GO:0009909 | ISO | PLAZA Integrative Orthology | regulation of flower development | AT1G52740 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT3G54560 |
| GO:0009908 | ISO | PLAZA Integrative Orthology | flower development | AT3G54560 |
| GO:0010468 | ISO | PLAZA Integrative Orthology | regulation of gene expression | AT1G52740 |
| GO:0006970 | ISO | PLAZA Integrative Orthology | response to osmotic stress | AT3G54560 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT1G52740 |
| GO:0016048 | ISO | PLAZA Integrative Orthology | detection of temperature stimulus | AT3G54560 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0046982 | IEA | InterPro | protein heterodimerization activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G52740 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000786 | IEA | InterPro | nucleosome | |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT1G52740 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.1.1.1 | Chromatin organisation.chromatin structure.DNA wrapping.histone (H2A) |